Convert PHASE 2.1 output to DnaSP input or to ped/map or vcf format?

Question

[janetw]

Hello,

Sorry if this is a duplicate question. I have searched but have not found a solution. I have run PHASE 2.1 and now have phased haplotypes. I would like to use these phased haplotypes to run a haplotype analysis and other analysis of DNA polymorphisms. Does anyone know how to convert from the PHASE output to a format that is compatible with either plink and/or DnaSP?

Any suggestions would be appreciated.

Thank you

Janet

[janetw]

Or to a format compatible with Haploview. Best, Janet