Tools For Major/Minor Allele Mining For A Given Snp

Question

[Radhouane Aniba]

Hi,

I have a bunch of SNPs (50K) and I would like to assign for each of them (they are in rs id format) their corresponding Major and Minor allele as well as MAF is available.

Can anyone point me to the right tool to use or Database to query ?

Thanks for your help

Rad

[Genotepes]

Would need more info. Do you need the MAF in your data set. In another dataset ? In a database ? beware that allele frequencies can vary according to population. So it it in Europids ?

Answer 1

[Malachi Griffith]

This question is not entirely clear. You can readily get this kind of information from the UCSC genome table browser:

[?]

Is that not the kind of thing you are talking about?

[Radhouane Aniba]

No, i don't think so