Assembly program of data

Question

[anasofiamoreira94]

Hello, I work with IonTorrent,and have a serious DNA animals fastqs. I start working with my data, but now I want to assembly my results, to improve them. I have to do it remotely, and can use a cloud resource. Can someone recommend a program? Thanks for the help and so sorry for the empty information

[GenoMax]

If you are asking a one-line question then you are not providing an adequate amount of detail for people to be able to provide a usable answer. Please edit the original post and add following information (assuming this is a WGS assembly request):

1. type of data
   
2. amount of data
   
3. if a related reference genome available
   
4. does remotely refer to use of cloud resources?
   
5. what is the aim of the assembly project.
   
6. do you know the size of the genome you are working with and its expected ploidy.

If you are looking to assemble a transcriptome then you should specify that as well.

[anasofiamoreira94]

I edited my post, so sorry. Hope this helps.

[JC]

Please be more descriptive: a) type: genome, transcriptome, metatranscriptome, metagenome b) technology: illumina, pacbio, nanopore, etc c) data: size, location, format d) biological: is a virus, bacteria, fungi, animal, plant

[anasofiamoreira94]

I edited my post, so sorry. Hope this helps.

[h.mon]

Use Galaxy.

[lieven.sterck]

Please go through [ Please read before posting a question ] -- How To Ask A Good Question and then consider editing your question.