SOAPdenovo2 vs ABySS
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5.6 years ago
soniabedi.07 ▴ 30

Which tool will be faster for assembling ~1.5 GB eukaryotic genome with 250X (combined) of paired end and mate pair reads. Also which is the better tool? SOAPdenovo2 or ABySS??

assembly • 1.1k views
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I have used both assemblers, in my case I got better assembly through Abyss assembler

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