Retrieving sequence from NCBI
1
0
Entering edit mode
5.1 years ago
ashaneev07 ▴ 40

I've a species list and a gene list. I need to create a file which contains sequence of each species with respect to that gene. Is there any easy way to retrieve sequence from ncbi as i needed ? Otherwise it is difficult to do one by one. also time consuming. Your consideration will be a sort of great favor. Thank You..

ncbi blast list • 891 views
ADD COMMENT
0
Entering edit mode

Can you share an example of what sorta data you have? Do you have gene names or NCBI gene ids?

ADD REPLY
0
Entering edit mode
5.1 years ago
JC 13k

Use E-utilities, with minimal programming you can do it with BioPython

ADD COMMENT

Login before adding your answer.

Traffic: 2664 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6