Finding depth of genes
0
0
Entering edit mode
5.1 years ago
Hansen_869 ▴ 80

Hi there!

I have just generated a fasta file, containing the genes (with corresponding gene function names) of a bin. The bin was found using Maxbin2 and the genes were then found using Prokka. The next step, is to find the depth of each of the genes. I have the raw reads, and were planning to use BWA on the genes, with the raw reads. Is this the correct procedure?

Thanks

snakemake depth prokka samtools • 765 views
ADD COMMENT

Login before adding your answer.

Traffic: 1692 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6