What tool displays DNA to protein translation alignments in a text-style visualization?
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5.1 years ago
Tawny ▴ 180

I am looking for a tool that will display the original DNA sequence aligned to its' protein translation(s). I have been searching online and not finding a suitable tool. Can anyone recommend a tool?

alignment • 1.2k views
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5.1 years ago
Brice Sarver ★ 3.8k

If by 'aligned to translations' you mean 'converted to translation,' you can look into Geneious. I recall it has a view below the sequence of all translation frames (e.g., 0, +1, +2). It looks like Jalview will do this, too.

Geneious Prime is currently subscription-based for academic and commercial users, but my comment above was from experience with the free features of Geneious from earlier releases.

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If you are recommending a commercial program then please add an appropriate disclaimer, if the program is not free (Geneious).

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Thanks - clarified above.

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Jalview provides what I need. Thank you for pointing me to it!

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