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5.1 years ago
spence.lank
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10
I can't seem to find metadata on the output of GeneMarkS-2. I'm trying to figure out what the last 4 columns mean in the data below in particular. Any guidance would be greatly appreciated. Thank you.
# GeneMark.hmm-2 version: 1.04
# File with sequence: seq.fna
# File with native parameters: GMS2.mod
# File with MetaGeneMark parameters: /home/genemark/bin/gms2/mgm_11.mod
#
# start: Sat Oct 26 22:01:09 2019
# Sequence meta data: >CP033686.1 Pseudomonas aeruginosa strain H25883 chromosome, complete genome
# sequence-region 1 6706800
SequenceID: 1
1 + 22 1539 1518 native TTGGCA 7 1
2 + 1568 2671 1104 native AGGGAC 6 1
3 + 2681 3790 1110 atypical AATCAC 5 1