Error in pypeliner
0
0
Entering edit mode
5.0 years ago

I unable to proceed

library(survival)
data<-read.table("KM_plot_input.txt",header=T,row.names=1)
x<-survfit(Surv(data[,2],data[,3])~data[,1])
survdiff(Surv(data[,2],data[,3])~data[,1])

This returns: raise PipelineException('pipeline failed') pypeliner.scheduler.PipelineException: pipeline failed

sequencing • 1.2k views
ADD COMMENT
0
Entering edit mode

I think you need to ask on stackoverflow (today I've learnt)

ADD REPLY
0
Entering edit mode

What does your R code have to do with a python program?

ADD REPLY
0
Entering edit mode

Do you run that R codes via command line (or RStudio) or is this wrapped into some kind of pipeline / workflow manager?

ADD REPLY

Login before adding your answer.

Traffic: 2555 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6