Hello,
I have used update_blastdb.pl with Ubuntu 18 and it worked. I tried with ubuntu 19.04 and I am getting:
$ perl `which update_blastdb.pl`
Can't locate List/MoreUtils.pm in @INC (you may need to install the List::MoreUtils module) (@INC contains: /home/gigiux/src/anaconda/lib/site_perl/5.26.2/x86_64-linux-thread-multi /home/gigiux/src/anaconda/lib/site_perl/5.26.2 /home/gigiux/src/anaconda/lib/5.26.2/x86_64-linux-thread-multi /home/gigiux/src/anaconda/lib/5.26.2 .) at /home/gigiux/src/anaconda/bin/update_blastdb.pl line 43.
BEGIN failed--compilation aborted at /home/gigiux/src/anaconda/bin/update_blastdb.pl line 43.
I tried to install MoreUtils with conda install perl-list-moreutils
, cpanm List::MoreUtils
and apt-get install moreutils
and I also changed the shebang from #!/usr/bin/perl
to #!/usr/bin/env perl
. The installation gave no errors but I can't launch update_blastdb.pl.
Any tips?
Thank you
I'd advise against conda for perl. Use perlbrew and install modules with cpanm