Imputation from multiple reference panels softwares

Question

[mel22]

Hello , Is it possible with "Beagle 5.1" to take more than one phased refernce panel for phasing and imputation ? I have two phased refernce panels and want to use them both

If not do you now any other sofware doing this ?

Thank you very much

Answer 1

[Kevin Blighe]

IMPUTE2 can do it, depending on how well is the overlap between your datasets, though.

Kevin