An error in using SRAtoolkit

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5.0 years ago

Andrew Liu ▴ 10

Here is an unknown error occurred when I use the latest version of SRAtoolkit.

Can't locate JSON/PP.pm in @INC (@INC contains: /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at ./prefetch line 12.

genome next-gen RNA-Seq • 780 views

ADD COMMENT • link updated 5.0 years ago by ATpoint 86k • written 5.0 years ago by Andrew Liu ▴ 10

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Entering edit mode

It means that the indicated Perl module is missing. Is this the precompiled binary of the tool you are using? What is the command you run? Try installing JSON::PP, please use google for a how-to. Lots of posts on this out there.

ADD REPLY • link 5.0 years ago by ATpoint 86k

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