query on salmon installation

0

Entering edit mode

4.9 years ago

treesavictor83 • 0

I have installed the trinity package using docker. All the packages for trinity get installed but even after installing and unpacking salmon ,its not working. Can anyone suggest a solution for my query?

next-gen • 1.3k views

ADD COMMENT • link 4.9 years ago by treesavictor83 • 0

0

Entering edit mode

its not working

ADD REPLY • link 4.9 years ago by Pierre Lindenbaum 164k

0

Entering edit mode

Hi treesavictor83,

please explain what is not working = provide a precise error message. Without that it is impossible to help.

ADD REPLY • link 4.9 years ago by ATpoint 85k

0

Entering edit mode

I have installed salmon and its there in my system.But while searching for the installation command i have these error message dpkg-query: package 'salmon' is not installed

ADD REPLY • link 4.9 years ago by treesavictor83 • 0

0

Entering edit mode

Is inside the docker environment and is the executable in PATH?

ADD REPLY • link 4.9 years ago by ATpoint 85k

0

Entering edit mode

Yes sir.It is executable inside the path

ADD REPLY • link 4.9 years ago by treesavictor83 • 0

0

Entering edit mode

What do you get with which salmon?

ADD REPLY • link 4.9 years ago by GenoMax 147k

0

Entering edit mode

then set the PATH in ~/.bashrc

ADD REPLY • link 4.9 years ago by skjobs ▴ 190

Login before adding your answer.