query on salmon installation

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5.0 years ago

treesavictor83 ▴ 10

I have installed the trinity package using docker. All the packages for trinity get installed but even after installing and unpacking salmon ,its not working. Can anyone suggest a solution for my query?

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ADD COMMENT • link 5.0 years ago by treesavictor83 ▴ 10

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its not working

ADD REPLY • link 5.0 years ago by Pierre Lindenbaum 164k

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Hi treesavictor83,

please explain what is not working = provide a precise error message. Without that it is impossible to help.

ADD REPLY • link 5.0 years ago by ATpoint 86k

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I have installed salmon and its there in my system.But while searching for the installation command i have these error message dpkg-query: package 'salmon' is not installed

ADD REPLY • link 5.0 years ago by treesavictor83 ▴ 10

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Is inside the docker environment and is the executable in PATH?

ADD REPLY • link 5.0 years ago by ATpoint 86k

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Yes sir.It is executable inside the path

ADD REPLY • link 5.0 years ago by treesavictor83 ▴ 10

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What do you get with which salmon?

ADD REPLY • link 5.0 years ago by GenoMax 148k

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then set the PATH in ~/.bashrc

ADD REPLY • link 5.0 years ago by skjobs ▴ 190

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