How do BOLT and SAIGE calculate LD?... with PLINK LD?
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4.9 years ago
LayneSadler ▴ 90

When you run a PLINK GWAS, you run PLINK LD on the significant hits.

How is LD calculated for other association algorithms like BOLT and SAIGE?
plink bolt saige gwas • 1.0k views
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