Trouble installing mapper.pl from mirdeep2

Question

[jomagrax]

Hi everyone Im triyng to install mirdeep2 in ubuntu, both with conda and from source code (following this tutorial)

miRDeep2.pl works fine but for mapper.pl and quantifier.pl I get the following error message

Please run the install.pl script first before using the miRDeep2 package
The install script is located in /home/superuser/CAP-miRSEQ/build/mirdeep2_patch-mas so just do

cd /home/superuser/CAP-miRSEQ/build/mirdeep2_patch-mas
perl install.pl

Does any one have some idea?

Thanks in advance, Jose

Answer 1

[jomagrax]

As explained here If installing from conda just type

touch ~/.conda/envs/mirdeep2/install_successful