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4.8 years ago
fatema19.bge
•
0
Hi,Recently I modeled a protein using I tesser and then mutate the model using Swiss PDB Viewer.Now I want to minimize the energy by Nomad Ref server ( http://lorentz.dynstr.pasteur.fr/nomad-ref.php ) ,but i can't access the server. Anyone can tell me the way of accessing the server as well as suggest me the best way to minimize the energy please?
Thank You
Have you tried the following things:
-Write a short email to the admins of this service asking them about this problem? I have never used this service however to me it seems that the service is restricted to certain users.
-tried using other simulation suites (Gromacs, which is free to use) for energy minimization?
Thank You yes I already tried gromacs but this server needs linux command which is very tedious to me ...So i need alternate way to perform my target.. would you please suggest me the way of accessing the nomad ref server ?
Thanks again .