predicted protein and sequence
2
0
Entering edit mode
4.7 years ago
mdfardin374 ▴ 10

Hello, I have a list of genes and I am interested to know whether these genes have any experimental evidence either at RNA or protein level. How to go about this please let me know. Thank you

genome gene • 776 views
ADD COMMENT
1
Entering edit mode

Need more info to answer this. What organism? What have you tried/where have you looked? In general, showing that you've put some effort into trying to determine the answer to your question is considered polite and helps eradicate erroneous solutions that we may suggest otherwise.

ADD REPLY
0
Entering edit mode

The organism is Plasmodium Berghei and I tried NCBI database but do not know exactly what to see

ADD REPLY
2
Entering edit mode
4.7 years ago

This organism is in the Ensembl database. You can search for your genes of interest there. On each gene page, you can click the "Supporting Evidence" on the left-side navigation bar to see any evidence info about it, though my guess is that it'll be pretty sparse for a less common organism like this.

ADD COMMENT
2
Entering edit mode
4.7 years ago
GenoMax 147k

Another source would be UniProt. You can see that 41 records are in SwissProt so they are human curated/real. A further 12619 are in non-human curated TrEmbl database.

You can use UniProt ID mapping tool to map your gene ID's to UniProt.

ADD COMMENT

Login before adding your answer.

Traffic: 2023 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6