the transcription fasta file of Caenorhabditis elegans

Question

[yueli7]

Hello,

I want to find the transcription file of Caenorhabditis elegans.

I think it should be here, but I really can not find it. Below is the human transcription file.

Thank you in advance for any help!

Best,

Yue

ftp://ftp.ensembl.org/pub/release-99/fasta/caenorhabditis_elegans/

https://wormbase.org/species/c_elegans#4102--10

li@Desktop-590-p0xxx:~/bioawk$ head -n 10 gencode.v33.pc_transcripts.fa

>ENST00000641515.2|ENSG00000186092.6|OTTHUMG00000001094.4|OTTHUMT00000003223.4|OR4F5-202|OR4F5|2618|UTR5:1-60|CDS:61-1041|UTR3:1042-2618|
CCCAGATCTCTTCAGTTTTTATGCCTCATTCTGTGAAAATTGCTGTAGTCTCTTCCAGTT
ATGAAGAAGGTAACTGCAGAGGCTATTTCCTGGAATGAATCAACGAGTGAAACGAATAAC
TCTATGGTGACTGAATTCATTTTTCTGGGTCTCTCTGATTCTCAGGAACTCCAGACCTTC
CTATTTATGTTGTTTTTTGTATTCTATGGAGGAATCGTGTTTGGAAACCTTCTTATTGTC
ATAACAGTGGTATCTGACTCCCACCTTCACTCTCCCATGTACTTCCTGCTAGCCAACCTC
TCACTCATTGATCTGTCTCTGTCTTCAGTCACAGCCCCCAAGATGATTACTGACTTTTTC
AGCCAGCGCAAAGTCATCTCTTTCAAGGGCTGCCTTGTTCAGATATTTCTCCTTCACTTC
TTTGGTGGGAGTGAGATGGTGATCCTCATAGCCATGGGCTTTGACAGATATATAGCAATA
TGCAAGCCCCTACACTACACTACAATTATGTGTGGCAACGCATGTGTCGGCATTATGGCT

Answer 1

[gayachit]

I see the CDS file. Thats protein coding transcript file. Also the CDNA file

[yueli7]

Hello, gayachit,

Thank you so much for your great help!

Thank you again!

Best,

Yue