extract .gff files from prokka outputs

Question

[AbdelAbdel]

I need a comment line to extract .gff files from several prokka result folders. infiniment goods

[cschu181]

To clarify: you want to get only the gffs from a bunch of prokka output folders?

[AbdelAbdel]

yes yes exactly the same question

[cschu181]

Assuming all your prokka directories are subfolders of the same root (e.g. root/prokka1, root/prokka2, ...) and you want to copy the gffs into a folder /path/to/gff:

cp root/*/*.gff /path/to/gff/

[AbdelAbdel]

It's walking, thank you very much.