Network interaction for bacteria from different source

Question

[ce19resch01001]

Hi,

I am brand new to this,

I have done sanger sequencing for bacteria and fungi. I have an abundance table of different bacteria and fungal species from five different sources. I have 72 different species from five different locations. I would like to check their interaction using coNET plugin for Cytoscape, but unfortunately, I am facing issues in the very first step itself. can anyone help me with this?

[Jean-Karim Heriche]

Helping you would be easier if we knew what to help you with. What are the issues?