How to measure the similarity of operons from two species?

Question

[mrj]

I would like to measure the similarity among set of operons from different species. Is there a well-known method for this? If you can suggest me some good articles addressing this problem, I will be thankful to you.

[GenoMax]

Take a look at sibelia.

Answer 1

[alexandermcfarland2022]

Hi, please try GeneGrouper

It will look for all gene clusters in a set of genomes that contain a gene of interest. It will then show how similar those gene clusters are between taxa.