What tool should I use for the identification of DNA transposons?

Question

[Optimist]

I want to identify transposons and presence of transposase proteins in my bacterial genome, but don't know exactly which tool has good performance, any suggestion?

My genome is a complete genome with 4 mb size.

Stay indoors and Keep safe

Thanks in advance

[lieven.sterck]

this is honestly not a very difficult question. Can I inform what you have tried (found) so far?

[Optimist]

I have used ISFinder.

[lieven.sterck]

and? not working as expected (or providing results as expected)?

Should be an OK tool for what you want to do actually.

Answer 1

[lakhujanivijay]

Try this tool

[lieven.sterck]

ugh... not saying the tool is not useful but if in the intro it abusively uses the term homology (repeatedly) where it should be similarity , it quickly turns into a no-go for me ... :/ ,

unfortunate

[lakhujanivijay]

lieven.sterck +1 for that