Entering edit mode
4.7 years ago
k.kathirvel93
▴
310
Hi EveryOne,
I have BLASTp output which contains 8 columns, the 3rd column contains repeated aminiacid sequences one cell by one cell. Now i want to extract only reads which is repeated more than 10 times in 3rd column (along with other 7 columns). thanks. Sorry for not giving any examples, because the format is not fitting correctly in here.
hmmm, without at least some example data/output it will be quite impossible to assist you in this :/
it sounds already that is not a direct (normal?) blastp output file, correct? So you processed the output from blast already to get to the format you describe?
You can code-mark-up as follows: selecting the text and clicking the 101010 button. When you compose or edit a post that button is in your toolbar, see image below:
This should allow all kind of formats to be posted here (no need to post the whole output, the first 10-20 lines will do I suppose)