Question

How To Install Seqtk Into Mac

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12.7 years ago

tiida ▴ 10

Hi,

I'm a beginner for using terminal of MacOSX and CUI. I want to use "seqtk" for trimming of my fastq files. But I have no idea how to install the "seqtk" into my Mac. Does anyone teach me how to install and where to use it (in which directory)?

Thanks,

Tessi

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ADD COMMENT • link 12.7 years ago by tiida ▴ 10

score 2 · Answer 1 · 2012-04-21

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12.7 years ago

Istvan Albert 102k

Install the Apple Developer Tools Once that is done get the source and type make in the directory that contains seqtk.

ADD COMMENT • link 12.7 years ago by Istvan Albert 102k

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You can also install GCC on OSX directly from github without having to waste time signing up for an Apple Developer account. See here: https://github.com/kennethreitz/osx-gcc-installer/

ADD REPLY • link 12.7 years ago by Casey Bergman 18k

score 0 · Answer 2 · 2012-04-22

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12.7 years ago

tiida ▴ 10

Hi Istvan,

Thanks so much! Great, it works!!

Tessi

ADD COMMENT • link 12.7 years ago by tiida ▴ 10

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HI Tessi - Please use the comment function to follow up to answers in the future.

ADD REPLY • link 12.7 years ago by Casey Bergman 18k