Microarray data do not have GEO2R option?
1
0
Entering edit mode
4.6 years ago
bio • 0

I found that there is no GEO2R option for every expression data on GEO database of NCBI to find the differentially expressed genes in normal and disease tissues. Do anybody know the reason

RNA-Seq • 1.6k views
ADD COMMENT
0
Entering edit mode

I was talking about this series GSE97418. It's microarray data.

ADD REPLY
0
Entering edit mode

If you try the geoR link for this series it just says there is no data for analysis. Perhaps because these seem to be circRNA data.

ADD REPLY
0
Entering edit mode

This series GSE101684 also contain circRNA data but it has GEO2R function to use.

ADD REPLY
0
Entering edit mode

I suggest that you email GEO help desk and ask them. NCBI support may take one or two business days to respond so you will need to be patient.

ADD REPLY
0
Entering edit mode

okay, thanks for suggestion

ADD REPLY
0
Entering edit mode

This series GSE101684 also contain circRNA data but it has GEO2R function to use.

ADD REPLY
0
Entering edit mode
4.6 years ago

Hi, Be sure that the platform is actually microarray, and that your are on the Reference Series, rather than datasets.

ADD COMMENT

Login before adding your answer.

Traffic: 1791 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6