Fasta Indexing for SNP Analysis
0
1
Entering edit mode
4.6 years ago

Hi! I am trying to carry out an SNP Analysis on Mycobacterium tuberculosis sequences. I am unfortunately not able to annotate it, and think the problem lies with the fasta index and dictionary files, which were created

The accession number of the fasta sequence is >NC_018143.2.

When I run a fasta index, this is the result generated:

NC_018143.2 4411709 65 70 71

Any advice on how to move forward would be very helpful!

I am very confused about whether the file generated is correct.

Thank you!

SNP Bacterium • 468 views
ADD COMMENT
0
Entering edit mode

How did you generate the index? What exactly are you listing in the result above?

ADD REPLY

Login before adding your answer.

Traffic: 2342 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6