Need help in making corrlation plot
1
0
Entering edit mode
4.7 years ago
pbm11 • 0

Hello everyone

I want to make a correlation plot for the following matrix, with hierarchical clustering. Can anyone suggest me how to make in R?

      S1    S2  S3  S4  S5  S6  S7  S7

GeneA 9 4 3 3 5 8 5 7 GeneB 4 3 5 8 7 3 3 5 GeneC 0 8 3 3 5 2 1 3

I have 2 conditions

Group Condition S1 1 S2 2 S3 1 S4 2 S5 1 S6 2 S7 1 S8 2

Thanks in advance

rna-seq next-gen R correlation plot • 898 views
ADD COMMENT
0
Entering edit mode
4.7 years ago
Yean ▴ 140

check this out ComplexHeatmap.

The tutorial is quire easy to follow

ADD COMMENT

Login before adding your answer.

Traffic: 1581 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6