XML to Word using R
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4.6 years ago
Tastulek • 0

Hello BioSar Community Members,

I have a list of GI numbers of mtDNA sequences from GenBank which were stored in an XML file. Now I would like to convert XML format into Word format while keeping original format and style. I tried to use R [(library(XML) [library(stringr) library(methods)] to carry out the task, but not successful.

Do you have any suggestions?

Here is the content of the XML file

<content> <en-note>

R sequence • 756 views
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XML does not have format or style, it's just a data transport markup language. Are you trying to parse it to get the data content? Why do you need the result to be in "Word" format? Are you referring to plain text? We do not use MS Office formats (other than Excel) in bioinformatics.

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Hi RamRS,

Thanks for the comments!

Yes, actually I would like to have the seq IDs in plain text format in order to use the seq ID list text file for downloading the mtDNA sequences in batch.

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