Mageck pathway command
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7.3 years ago
11yj3312 ▴ 20

I obtain a pathway summary by using mageck pathway command,as follows: id num neg|score neg|p-value neg|fdr neg|rank neg|goodsgrna pos|score pos|p-value pos|fdr pos|rank pos|goodsgrna KEGG_RIBOSOME 87 8.3272e-23 2.6473e-05 0.001238 1 50 0.051213 0.20927 0.841006 38 4 KEGG_SPLICEOSOME 125 3.7084e-08 2.6473e-05 0.001238 2 41 0.52219 0.80968 0.99902 149 13 KEGG_PROTEASOME 44 1.9586e-06 2.6473e-05 0.001238 3 18 0.52149 0.80905 0.99902 148 5 How can I kown the genes in each pathway?

software error sequence gene • 1.7k views
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Anyone knows how to do it?

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