Question

Gene Ontology and KEGG pathway enrichment

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4.5 years ago

basucsmcri • 0

I have a list of DEGs of Staphylococcus epidermis and I want to perform GO enrichment and KEGG pathway enrichment analysis in R. can anybody please help in this regard.

I will appreciate your help.

Thanks
Basit

RNA-Seq • 1.1k views

ADD COMMENT • link updated 17 months ago by Ram 44k • written 4.5 years ago by basucsmcri • 0

score 1 · Answer 1 · 2020-06-04

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4.5 years ago

asmitabioinfo2203 ▴ 20

Hi, see this link helpful for your problem https://bioc.ism.ac.jp/packages/3.7/workflows/vignettes/RnaSeqGeneEdgeRQL/inst/doc/edgeRQL.html

ADD COMMENT • link 4.5 years ago by asmitabioinfo2203 ▴ 20

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Thanks a lot. I will give it a try, let us see if it works. Thanks

ADD REPLY • link 4.5 years ago by basucsmcri • 0