How to obtain PEG IDs from a list of FASTA Sequences
0
0
Entering edit mode
4.5 years ago
tastafor ▴ 10

Hi,

i have a list of FASTA sequences. I have been going to the SEED Viewer (https://pubseed.theseed.org/seedviewer.cgi?page=BlastRun) and running a BLAST of the FASTA sequence vs a few bacteria species to then obtain the peg ID from the BLAST output.

Is there a way to automate this process, to find PEG IDs by using a list of FASTA sequences as input?
seed seedviewer peg fasta blast • 737 views
ADD COMMENT •
0
Entering edit mode

What is a PEG ID?

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 1933 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6