Entering edit mode
4.5 years ago
jeni
▴
90
Hi!
Is there anyway to reduce a GRanges object taking into account different lengths of overlapping?
For example:
seqnames IRanges
1 100-200
1 110-199
1 150-500
Although all this genomic ranges are overlaping, I would like to obtain those different intervals, considering also as different those overlaping with a length lower than the 30% of the mean length of each compared intervals.
In this case, I would like to get:
seqnames IRanges
1 100-200
1 150-500