Entering edit mode
4.5 years ago
dpc
▴
250
Hi community!!! I am analysing already submitted (in SRA) metagenome sequence data by MOTHUR software. here is some confusions
I am seeing in SOP the
cut off
value fordist.seqs
step is set to0.03
. In some other protocol I've also seen to set as0.2
. So, I'm confused, what value should I actually use for my study.Should I use the same value for cutoff in
cluster(column=, count=, cutoff=)
step also?
Can anyone please help me?