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4.4 years ago
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Hi all,
in some references of NCBI, for example Sars-cov-2: https://www.ncbi.nlm.nih.gov/nuccore/NC_045512
some CDS are represented as: join(266..13468,13468..21555)
What does it means? The product is a protein where the it looks like the nucleotide at position 13468 has been used twice. How is the correct interpretation?
That particular annotation also includes following information:
You can see the protein complement of SARS-CoV-2 virus in this table. This is probably a bit of a moving target since we are still understanding all things that this virus is capable of doing including its genome.
To add the site
join(266..13468,13468..21555)
has a note/note="pp1ab; translated by -1 ribosomal frameshift"