Entering edit mode
4.5 years ago
mo.ghasemi717
▴
10
hi everybody; I installed SRA toolkit last day but when I want to use prefetch this message appears:
This SRA tool kit installation has not been configured what's the problem??
I saw it before but I can't understand it, could you please help me?
If you install it with conda you won't have to configure anything
You need to set a temp directory where prefetch can download/store data. Directions are clear on the page I linked. You need to run
./vdb-config -i
from within the bin directory. You should then see the text GUI. Change between different options usingtab
key. Minimally you should just need to run the config program, tab over toExit
button (pressing 7 may do the same) and then save when you exit.If you find this complicated then install a new copy of sratoolkit using
conda
as noted by @jordi.