MACS peak calling error

Question

[sidrah.maryam]

Hello, I am on step peak calling using macs2. However, I am getting this error: from MACS2.Constants import * ModuleNotFoundError: No module named 'MACS2'

However, macs is already installed. Please suggest what should I do.

[Diedes]

Maybe the path in which the program is looking for modules is not the same path in which your module is actually installed?

[student12]

I’m unsure about Mac, but I recently did some peakcalling using ChipSeeker and ChipPeakAnno, which are packages in R. I used a bed file.

[Ram]

This does not answer OP's question. Please do not add answers unless they actually do answer the question.

Answer 1

[Shalu Jhanwar]

This error might be related to the path where it is installed. Have a look at the thread: https://github.com/macs3-project/MACS/issues/132

[sidrah.maryam]

Thank you !! It solved the problem. The command was using macs2 installed at a different path.

[Ram]

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