Entering edit mode
4.3 years ago
yousefifariba6
•
0
42196180 mates make up the pairs; of these this question have what means?
34851751 reads; of these:
34851751 (100.00%) were paired; of these:
28104042 (80.64%) aligned concordantly 0 times
6097947 (17.50%) aligned concordantly exactly 1 time
649762 (1.86%) aligned concordantly >1 times
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28104042 pairs aligned concordantly 0 times; of these:
612899 (2.18%) aligned discordantly 1 time
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27491143 pairs aligned 0 times concordantly or discordantly; of these:
54982286 mates make up the pairs; of these:
52538050 (95.55%) aligned 0 times
2280319 (4.15%) aligned exactly 1 time
163917 (0.30%) aligned >1 times
24.63% overall alignment rate
What is your question exactly? The output is pretty self-explanatory...