Improving PacBio Assembly with Illumina reads

Question

[pablo]

Hello,

I had to make an assembly with PacBio reads . It is a bacterial genome (~ 4Mb ) .

For some of the samples, I got 1 contig but for some others, I got 2 to 4 contigs while I would like to get only 1 contig .

Could it be a solution to use Illumina reads and an hybrid assembler to polish my PacBio assemblies?

Bests

[GenoMax]

Have you seen:
Polish PacBio assembly with latest PacBio tools : an affordable solution for everyone
A: To reassemble Illumina and PacBio, or just upgrade previous assembly with PacBio

[pablo]

Thanks for the tips.

I'm probably gonna use Pilon to polish my assemblies with Illumina reads, in order to get 1 contig.