How to predict protein structure changes based on ensembl base changes

Question

[bryanchang2016]

Hello, I am new to bioinformatics, but I wanted to make predictions on protein structure based on some base changes I've identified using ensembl in Cryptococcus neoformans. At the moment I've got a list of genes and the variant bases, however I am not sure how I can use this data to make predictions on protein structure. Is dynamut a good software to use, and if so what format should I input the data since I don't know which protein chain a mutation is likely to affect. Thanks for your help!

Answer 1

[jgreener]

PhyreRisk (http://phyrerisk.bc.ic.ac.uk) lets you explore variant effects on protein structure by inputting genetic coordinates.