Regions & Covered BED files for Agilent SureSelect All Exons v2

Question

[newbio17]

Hello,

I've been looking for Agilent SureSelect All Exons v2 BED files for some time and need some assistance. The Agilent website doesn't seem to have anything below v4. Does anyone have access to Covered BED file?

I think I found a Regions one, but I want to make sure that for older versions of this capture kit (below v5), Regions and Covered BED files are essentially the same (I noticed that the BED files are the same for v4 & v5, but not for v6 & v7).

Thanks!

Answer 1

[newbio17]

I was able to reach out to informatics team at Agilent. They sent me a link to download the relevant BED files for v2 kit which was not available on their website.

EDIT: Informatics team had no problem with me sharing the .bed files, so I'm attaching the link I received from them here in case anyone else needs it.

[Ram]

Is that a public link? If possible, can you check with them and share that link here so it would be useful to others looking for this resource please?

[newbio17]

I sent them an email asking if it's okay to share the link/files. I'll follow up once I receive a reply from them.

Updated original post to reflect the download link.