How many samples are too few for Hardy Weinberg equilibrium test?
0
0
Entering edit mode
4.3 years ago
curious ▴ 820

Trying to do QC on genotype data and want to run HWE test w/ plink.

I have 60 samples, which seems may be on the low side, but I can't find too much on how small of sample size is too small.

These guys seem to suggest 20 is too low: https://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000400604

Does anyone have any experience with this?

gwas • 577 views
ADD COMMENT

Login before adding your answer.

Traffic: 1787 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6