How to set the motif length in MEME.

Question

[feng920308]

I used meme-chip command to find my motif in the ChIPseq data. However, my results had 25 bp. The paper shows that the motif had only 18 bp. Therefore, I want to know which command I can use to set the length of the motif in meme-chip.

Answer 1

[JC]

Check the parameters with meme-chip -help or in http://meme-suite.org/doc/meme-chip.html