Obtain gene names for the SNPs from GWAS result
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4.2 years ago
Mahan ▴ 70

Is there any tool/package to obtain the gene names for the SNPs of my interest from a GWAS analysis?

GWAS Results Association File Gene names • 905 views
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I think you should be able to use bedtools to intersect SNP position with annotation file and get the gene names.

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