Entering edit mode
4.2 years ago
krakenmaken
•
0
Hello,
I try to compare the results of Blast and Kraken for the same data set. I stumbled upon this script that converts a Blast result into a Kraken report. At least I understood it this way, because I do not speak Chinese.
Unfortunately I always get several errors and no reasonable Kraken report as a result. In these errors the word TaxDB appears again and again. Therefore I assume that I might choose the wrong file there.
Does anyone know which file exactly is meant by TaxDB in this context?
Thanks in advance!
I don't know chinese but Perl, in the section which loads the taxonomy file, it expects a TSV file with these columns:
Not sure how is that generated