PCA using ggplot2/ggfortify autoplot function ?
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4.2 years ago
sunnykevin97 ▴ 990

HI

With the normalized+ transformed gene-counts information using autoplot function plotted the PCA. I had additional data something like hormonal levels(6 variables), is it possible to show that information as well along with the genecounts information on one PCA plot? PCA

autoplot(sample_pca,data = sample_info,colour = "sample",shape = "treatment")

some suggestions.

PCA

RNA-Seq • 1.2k views
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