How to make a PCA plot in three dimensional-RNA-Seq analysis
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4.1 years ago
Kumar ▴ 170

Hi, I have 187 samples with two factors: (affected and unaffected) and (male and female) for RNA-Seq data analysis. I am using DESeq2 for DGE analysis. Therefore, I am trying to make a PCA plot to make different groups in three dimensional. I have tried to make a PCA here pca-rld. However, I need to make it in three dimensional with different groups. Please suggest if I can make a PCA plot for this study.

rna-seq PCA next-gen • 1.4k views
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This has been discussed several times on Biostars and elsewhere. Several answers here that will be helpful for you.

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