How to download hg38 for spliceAI
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4.1 years ago

Hi everyone, this is my first post and I'm also fairly new to bioinformatics. I am trying to use spliceAI with the grch38 assembly and my question is:

1) The link provided on the github splice AI page to download the grch38 assembly downloads it as a gz file, and it seems to take forever to expand, and using gzip on it at the command line also says "gzip: standard input is a terminal -- ignoring".

Does anyone have a recommendation on how to expand it better / is there another file people know of that could be used here?

Thank you!!

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