Prediction of domains of a protein and LRR domains

Question

[Bruna Avelino]

I like to know what software or website I can predict my protein domains. I would also like to know a specific one for the LRR domains

Thanks.

[Bruna Avelino]

Thank you very much. ️

Answer 1

[Fatima]

Conserved domains were predicted for the Xiu94-11, Zhonghuang47, Qichadou1, Ludou4, and Williams82 sequences with the Conserved Domain Database (http://www.ncbi.nlm.nih.gov/cdd/) [65] and SMART (http://smart.embl-heidelberg.de/) [66].

CD-Search http://www.ncbi.nlm.nih.gov/cdd/

SMART http://smart.embl-heidelberg.de/

Answer 2

[Elisabeth Gasteiger]

InterPro https://www.ebi.ac.uk/interpro/

ScanProsite https://prosite.expasy.org/scanprosite/

PROSITE LRR profile: https://prosite.expasy.org/PDOC51450

InterPro LRR: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001611/