How to find the gene name and classification using Ensembl ID?
1
0
Entering edit mode
4.0 years ago

Hello All I have a file containing a list of onding and non- coding genes (2500 numbers). I want to know the name of those genes as text or CSV format. How to convert it Thank you

genome ensembl lncRNA • 744 views
ADD COMMENT
1
Entering edit mode
4.0 years ago

There are plenty of options. Use the Ensembl BioMart or the Ensembl perl API. If using R, there are several Bioconductor packages available such as biomaRt or EnsDb.Hsapiens.vXX (where XX stands for the Ensembl version).

ADD COMMENT

Login before adding your answer.

Traffic: 2500 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6